Metabolite Profiling and Identification

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Metabolite Profiling and Identification

Platform Introduction

Drug metabolism studies run through the entire process of drug development. The information about metabolic pathways and metabolite structures of test compounds is vital for the design and optimization of lead compounds, selecting clinical drug candidates and supporting clinical studies, drug-drug interaction evaluation, and metabolites in safety testing in drug development. Metabolite profiling and identification (MetID) studies are helpful to understand clearance pathways to find potentially active or reactive metabolites and observe disproportionate or unique metabolites. Consequently, it leads to a better understanding of the effects of biotransformation on drug efficacy and safety.

In the process of screening lead compounds, metabolite identification can screen the formation of reactive metabolites and other potentially problematic metabolites. Based on results from in vitro metabolite identification, metabolic soft spots can be quickly identified for optimizing the structure of lead compounds and thus obtain better efficacy.

In the preclinical study stage, in vitro MetID studies of multiple species can be used to obtain cross-species metabolic differences. Comparing the in vivo and in vivo metabolism data of animal can determine if there is a good in vitro-in vivo correlation of metabolism, which can further ensure the reliability of using in vitro metabolism to predict in vivo metabolism in human.

In the phase I clinical trial results from metabolite profiling in human plasma, urine, and feces can reveal qualitative and semi-quantitative exposure of drug-related components to human and drug clearance and metabolic pathways in human. It can be determined if the selection of toxicological species is appropriate after comparing the exposure of metabolites to human and tox species when repeated doses are assessed.

Radio-profiling can effectively study the metabolism, distribution, and clearance of a drug in an animal or human. Profiling and identification of Radiolabeled metabolites in plasma can determine qualitatively and semi-quantitatively drug-related components in the circulating system. The results can establish the basis for deciding the dose-exposure relationship of drugs and may help interpretation if toxicity observed is associated with the parent drug or its major metabolites in plasma. Profiles of Radiolabeled metabolites in bile, urine, and feces can provide information on the drug clearance and metabolic pathways in vivo, which can further help the experimental design of metabolizing enzyme phenotyping and transporter substrate analysis.

Our MetID Platform

We provide comprehensive MetID services, including MetID in biological matrices to support drug discovery and safety studies, metabolite isolation, and identification by NMR. The services cover lead compound optimization in the drug discovery stage to the clinical trial stage, including radiolabeled ADME study in animal and human.

Our team of scientists can design bespoke experiments to overcome unique and complex challenges in metabolism study. We work hand in hand with pharmaceutical industries, research centers, and departments in WuXi AppTec to solve problems quickly and efficiently. We ensure timely delivery of reports that meet relevant regulatory requirements (FDA, EMA, NMPA, etc.). Our flexible, customized MetID solutions are designed to meet the requests of our customers.

Development Process and Service Provided

Hit to lead
01

Guide the selection and optimization of lead compounds through metabolic soft spot analysis and reactive metabolite screening

Lead optimization
02

Guide the structure optimization of lead compound by metabolic soft spot analysis as well as reactive metabolite analysis

Evaluate major in vitro/in vivo metabolites to guide optimization of compound structure

Preclinical candidate (PCC)
03

Evaluate correlation of metabolism in in vitro/in vivo to guide drug candidate selected

Evaluate the in vitro metabolism cross-species. Select species for the subsequent toxicology studies.

Investigational New Drug (IND) application
04

Provide complete documents of in vitro/in vivo metabolite profiling and identification study

Support preclinical investigational new drug application (FDA/NMPA/EMA)

Post IND
05

Customized solution for complex problems encountered in the late stages of drug research

Analyze the metabolite distribution of drugs in human circulation and obtain drug metabolism/elimination pathways

Assessment of major metabolic and/or elimination pathways

Evaluation of the safety of metabolites, assessing whether the toxicological species is appropriate and covers the metabolite exposure in human

Key Features

Well-established experimental system for Metabolite Profiling and Identification (MetID)

Well established experimental system for MetID

Metabolite identification in various complex matrices includes in vitro incubations with liver/kidney/lung/intestinal microsomes, S9, lysosomes, recombinant enzymes, hepatocytes, tumor cells, plasma, and blood and in vivo samples of plasma, urine, feces, bile, and various tissues.

Wide range of compound types

Metabolite identification of test compounds with various structures and chemical properties, including regular small molecules, extremely polar and nonpolar small molecules, natural products, small molecular nucleotide compounds, Proteolysis-Targeting Chimeras(PROTACs), polysaccharides, peptides, ADCs, oligonucleotides, PDCs, etc.

Wide range of compound types
Customized experimental design for special needs of Metabolite Profiling and Identification

Well established experimental system for MetID

Metabolite identification in various complex matrices includes in vitro incubations with liver/kidney/lung/intestinal microsomes, S9, lysosomes, recombinant enzymes, hepatocytes, tumor cells, plasma, and blood and in vivo samples of plasma, urine, feces, bile, and various tissues.

Our Strengths

Efficiency

Thousands of metabolite identification projects/year

Resource Collaboration

Work closely with WuXi AppTec's radioisotope chemical synthesis team to rapidly promote the progress of isotope projects

Highly Equipped Instrument

High-resolution mass spectrometry provide high accuracy data

Full Service

Cover both non-radioactive and radioactive metabolite profiling and identification service, without method transferring and reducing additional time costs

Excellence

The integrated quality control system is in place to monitor the quality of studies from the beginning of the experiment to the final report delivery

Expert Team

Expert with over 20 years’ experience in medicinal chemistry reviews elucidation of metabolite structures
A well-known expert on drug metabolism participates in study design and data interpretation

Instruments and Software

High Resolution Mass Spectrometry

Orbitrap Eclipse™ Tribrid™

Orbitrap Exploris™ 480

Q-Exactive™ HF

VION™ IMS QTof

Q-Exactive™ Plus

Q-Exactive™

LTQ Orbitrap XL

Xevo®G2 QTof

Software for Data Process

Equipment for Radioactivity Detection

TopCount.NXT™
MicroBeta

Solid scintillation counter:
off-line detection of radioactivity

Tri-Carb 3110TR

Liquid scintillation counter:
total radioactivity detection

v.ARC™
Beta-RAM

On-line detection
of radioactivity

Main Assay Type

Metabolite Profiling and Identification Main Assay Type-MetID Main Assay Type
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